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Intellectual Property Considerations in Cell Therapy Developments – An EPO Perspective

By Gilles Pfend, Ph.D., European and Swiss Patent Attorney and Ricardo Martin, Ph.D., European Patent Attorney – Katzarov, Patent & Trademark Attorneys

Cell therapies represent highly promising therapeutic approaches that are rapidly reshaping the landscape of cancer treatment and beyond. However, this dynamic field is accompanied by significant intellectual property challenges, particularly before the European Patent Office (EPO). In such an environment, strategic guidance from patent attorneys with deep scientific expertise and extensive experience in the sector is essential to secure robust, defensible protection and to preserve long-term competitive advantage.

The Expanding Intellectual Property Landscape of CAR-T Cell Therapies

The rapid evolution of cell therapies, in particular chimeric antigen receptor T (CAR-T) cell therapy, has generated a dense and increasingly complex intellectual property (IP) landscape.

According to statistics from the European Patent Office (EPO) published in 2019, the number of patent filings relating to CAR T-cell therapies increased sharply between 2013 and 2019, with a steady year-on-year rise in new applications. Since 2019, this upward trend has continued, with more than 700 patent families being filed annually worldwide. Updated EPO data further indicate that the leading applicants in the CAR T-cell field predominantly originate from China and the United States, while China, the PCT (Patent Cooperation Treaty) route, and the United States remain the most frequently selected filing jurisdictions.

Within the context of this publication, we will focus on the example of CAR-T cells. Recent scientific advances addressing CAR-T limitations and in vivo engineering strategies highlight several recurring areas of innovation: (i) in vivo CAR delivery, (ii) manufacturing optimization and enrichment of memory stem cells, (iii) armored CAR constructs with for example cytokine co-expression, (iv) strategies to mitigate resistance, and (v) modulation of exhaustion and cytotoxicity (increased CAR T-cell survival).

Based on our expertise, each of these innovation axes presents distinct challenges in terms of patentability under the European Patent Convention (EPC), as well as potential issues regarding freedom-to-operate (FTO) and enforceability.

Patentability Hurdles in Next-Generation CAR Design

A first consideration concerns the increasingly crowded prior art landscape surrounding CAR architecture. Foundational elements such as scFv-based binders (notably against CD19), hinge and costimulatory domains, cytokine-armored formats, and standard autologous manufacturing workflows are extensively disclosed. Novelty may often be acknowledged for specific structural configurations; however, inventive step will depend on whether the distinguishing features credibly solve a technical problem over the closest prior art.

In cases where modifications concern alternative cytokines, altered affinity binders, or additional functional domains, the EPO Examining Division is likely to assess whether such modifications represent routine design variations or whether they produce an unexpected technical effect. The inherent biological unpredictability of T cell engineering can support inventive step, but only where comparative data demonstrate a surprising improvement such as enhanced persistence, reduced exhaustion, mitigation of cytokine release syndrome, or improved therapeutic efficacy.

Applications directed to in vivo CAR delivery using targeted vectors or lipid nanoparticles introduce further complexity. At the EPO, broad functional claims risk objections under Articles 83 and 84 EPC if the disclosure does not enable the skilled person to achieve the claimed effect across the entire scope. The requirement of plausibility, as established by the Enlarged Board of Appeal of the EPO (G 02/21), is particularly important when therapeutic effects are claimed. The description must provide sufficient technical detail and examples to make the asserted therapeutic effect credible. Without supporting experimental data, the inventive step may be challenged either during examination at the EPO or later in opposition on the basis that the technical effect relied upon was not rendered plausible as of the filing date.

Process innovations relating to manufacturing efficiency and enrichment of T memory stem cell (TSCM) populations raise distinct issues. Where the contribution lies in producing a CAR-T composition enriched in a defined TSCM subset, it may be advantageous to formulate product claims characterized by measurable biological or physiological parameters (such as specific expression markers or an unexpected and/or enhanced phenotype), provided that such parameters are clearly defined, reproducible and not-present in TSCMs of the prior art.

Moreover, inventive step will depend on whether the skilled person, starting from known expansion protocols, would have reasonably expected that the claimed process parameters lead to the asserted enrichment effect.

Patentability of CAR constructs, including armored CAR-T cells co-expressing cytokines, must be assessed against extensive prior disclosures of fourth-generation CAR-T cells. The mere addition of, e.g. a cytokine molecule, may not suffice to establish inventive step if the prior art already suggests cytokine co-expression to enhance persistence or modulate the tumor microenvironment. Under the EPO’s problem-solution approach, the objective technical problem must be formulated in light of the closest prior art, and the application should contain evidence that the specific cytokine choice, expression configuration, or affinity tuning produces a technical effect that goes beyond a predictable enhancement of T cell activity. The EPO will scrutinize whether the skilled person, faced with issues such as relapse, antigen escape, or T cell exhaustion, would have considered the claimed modification as an obvious alternative. Comparative examples (think of referenced CAR T cell construct or standard) are likely to play a crucial role in the EPO’s evaluation.

Avoiding Added Subject-Matter in CAR-T Prosecution

An additional structural consideration concerns added subject-matter under Article 123(2) EPC. In rapidly evolving technology platforms where multiple variants are contemplated, amendments during prosecution must remain strictly within the content of the application as filed.

Combining features from different lists (for example, a list of targeted antigens and a list of specific CAR domains) or introducing intermediate generalizations (for example, isolating a cytokine feature from a particular CAR configuration) carries a significant risk of violating Article 123(2) EPC. Careful drafting at the priority or PCT stage, with clearly articulated fallback positions, examples and preferred lists, is therefore essential.

Integrating FTO Analysis into CAR-T Development Strategy

The field is characterized by a dense patent landscape in which key components such as CD19 binders (e.g. scFv), intracellular signaling domains (e.g. CD3z), transmembrane domains, costimulatory domains including CD28 and 4-1BB, and lipid nanoparticle (LNP) delivery systems may be subject to third-party rights. As a result, even technically differentiated products may face infringement risks at the level of individual subcomponents or enabling technologies. An effective innovation strategy should therefore combine early and iterative FTO assessments, particularly before significant clinical investment, with a layered patenting approach covering compositions, methods of manufacture, and therapeutic uses.

Conclusion

In conclusion, cell therapy and in particular next-generation CAR-T innovations operate within a technically unpredictable yet legally stringent environment under the EPC. Successful protection before the EPO requires a carefully substantiated technical effect, precise structural definition of distinguishing features, and examples evidencing the unexpected technical effects of these distinguishing features. In this field, inventive step will often turn not on the conceptual ambition of the technology, but on the quality and specificity of the experimental evidence supporting the claimed solution.

Furthermore, given the complexity of CAR T-cell manufacturing processes which often rely heavily on proprietary know-how and the difficulty in precisely identifying specific cell expression markers, maintaining certain aspects of the technology as trade secrets may, on a case-by-case basis, represent a strategically preferable approach to preserving competitive advantage.

 

Frequently Asked Questions

What makes CAR-T cell therapy difficult to patent at the EPO?

The CAR-T patent landscape is highly crowded. Foundational elements such as scFv-based binders, costimulatory domains, and cytokine-armored formats are extensively disclosed. To establish inventive step, applicants must demonstrate an unexpected technical effect for example, enhanced persistence or reduced exhaustion supported by comparative experimental data.

What is the EPO plausibility requirement for CAR-T therapeutic claims?

As established by the EPO Enlarged Board of Appeal in G 02/21, the therapeutic effect claimed must be rendered plausible as of the filing date. The description must provide sufficient technical detail and examples. Without supporting experimental data, inventive step can be challenged during examination or opposition.

What does Article 123(2) EPC mean for CAR-T prosecution strategy?

Article 123(2) EPC prohibits adding subject-matter beyond the content of the application as filed. In CAR-T prosecution, combining features from different lists or introducing intermediate generalizations carries significant risk. Careful drafting at the PCT or Priority stage with clearly articulated fallback positions is essential.

When should a CAR-T developer conduct a freedom-to-operate analysis?

FTO analysis should begin early and be conducted iteratively, particularly before significant clinical investment.

How can CAR-T developers protect manufacturing know-how that is difficult to patent?

Where manufacturing processes rely on proprietary know-how trade secret protection may be a strategically preferable alternative to patent filing, assessed on a case-by-case basis.

What filing jurisdictions dominate CAR-T patent activity?

According to EPO data, China, the PCT route, and the United States are the most frequently selected filing jurisdictions for CAR-T patents. Leading applicants predominantly originate from China and the United States, with more than 700 patent families filed annually worldwide since 2019.

At Katzarov SA, our Life Science Patent Attorney team combines deep scientific expertise in molecular and cell biology with extensive EPO prosecution experience to help innovators navigate the complex IP landscape of advanced cell therapies.

Contact our team to discuss your cell therapy IP strategy.

Gilles Pfend, Ph.D., European and Swiss Patent Attorney, has extensive expertise in protecting Cell and Gene Therapies (incl. gene editing). He regularly advises innovators and research teams on securing intellectual property in this highly complex and rapidly evolving field. Combining extensive IP experience with a strong foundation in molecular and cell biology, Gilles is widely recognized as an expert in the protection and strategic management of advanced therapeutic innovations.

Ricardo Martin, Ph.D., European Patent Attorney, has a strong scientific background and extensive experience in intellectual property. Having served as in-house counsel, he possesses a comprehensive understanding of the IP and scientific challenges faced by biopharmaceutical companies, with particular expertise in freedom-to-operate (FTO) matters.

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